anything on patheos.com. most of the site uses disqus as a commenting system. to get the URL for a thread, click "Share" on the top comment and choose the little picture of a link.
A site I read frequently that fits most of that is http://unfogged.com/. The iffy part is user accounts - there aren't really any in a technically-controlled way; people just sign their name or pseudonym to their comments. As a result there are a lot of joke pseudonyms that pop up occasionally, but the active commenter pool and their names are stable, and sock puppeting, etc. are both socially discouraged and stamped out by the site admins.
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