Whoops, somehow ended up forgetting about this. Anyway, here's the conclusion to this epic trilogy. With 2001 apparently being a key year for whatever reason.
Part 3: 1998 - 2011
Beastie Boys - Hello Nasty (1998)
Blur - 13 (1999)
Kula Shaker - Peasants, Pigs & Astronauts (1999)
Supergrass - Supergrass (1999)
Boredoms - Vision Creation Newsun (1999)
Radiohead - Kid A (2000)
Broadcast - The Noise Made By People (2000)
Bohren & Der Club Of Gore - Sunset Mission (2000)
Deichkind - Bitte Ziehen Sie Durch (2000)
Aphex Twin - Druqks (2001)
Judy And Mary - Warp (2001)
Kante - Zweilicht (2001)
Ladytron - 604 (2001)
Bis - Return To Central (2001)
The Strokes - Is This It? (2001)
Shiina Ringo - Kalk Samen Kuri no Hana (2003)
The Divine Comedy - Absent Friends (2004)
Dufus - Ball Of Design (2004)
Legowelt - Dark Days (2004)
William Shatner - Has Been (2004)
Franz Ferdinand - You Could Have It So Much Better (2005)
Lemon Demon - Damn Skippy (2005)
The Mars Volta - Frances The Mute (2005)
Beck - The Information (2006)
Battles - Mirrored (2007)
The Rakes - Ten New Messages (2007)
Simon Bookish - Everything/Everything (2008)
Beak> - Beak> (2009)
Animal Collective - Merriwheather Post Pavilion (2009)
The Horrors - Primary Colours (2009)
MGMT - Congratulations (2010)
LCD Soundsystem - This Is Happening (2010)
John Maus - We Must Become The Pitiless Censors Of Ourselves (2011)