You know how when you look at something that's not in focus, it's blurry? There's lost information there -- you can't resolve things very well when they're not in focus. But there are ways to correct for that. If you know how your sample blurs, then you can look at a blurred image and do a pretty good job of reconstructing what the nonblurred image
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But it sounds like you're saying "put a camera on a tripod, take images with multiple focal lengths, reconstruct a 3D image from the result". I think the problem you'll run into there is that you can't see around things using that approach -- you need multiple viewpoints to get what we generally think of a a 3D image. But you could probably get a depth map, i.e. knowing how far a given part of the image is from the camera.
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